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Mangrove Transcriptome Database (v3)

Search Genes

Species Gene ID (exact) Locus (exact) Annotation Alternative names
GO Function GO Process GO Component
GO Slim Function GO Slim Process GO Slim Component

Listing Genes

Genes found: 16028

Gene ID Locus Annotation Alternative names Seq
Query: Species Query Name Size GI Accession Short ID E-value Mean Similarity Alignment Length GO Function GO Process GO Component GO Slim Function GO Slim Process GO Slim Component
6436117 MtrDRAFT_AC149032g14v2 Protein of unknown function DUF6, transmembrane[Medicago truncatula] download
 
Rhizophora mangle Rmv3_7922 515 87162801 ABD28596 mtn21-like protein 1.44E-28 84 288 membrane; membrane;
6436256 MtrDRAFT_AC152185g14v2 ATP-citrate lyase/succinyl-CoA ligase[Medicago truncatula] download
 
Rhizophora mangle Rmv3_14593 410 124359946 ABN07962 atp citrate lyase a-subunit 1.86E-59 99 339 acyltransferase activity; binding; ATP citrate synthase activity; succinate-CoA ligase (ADP-forming) activity; lyase activity; acetyl-CoA biosynthetic process; cellular carbohydrate metabolic process; acyl-carrier-protein biosynthetic process; reductive tricarboxylic acid cycle; citrate lyase complex; succinate-CoA ligase complex; transferase activity; binding; catalytic activity; biosynthetic process; cellular process; carbohydrate metabolic process; generation of precursor metabolites and energy; catabolic process; cytoplasm;
6436360 MtrDRAFT_AC149130g13v2 Endonuclease/exonuclease/phosphatase[Medicago truncatula] download
 
Rhizophora mangle Rmv3_27639 549 87162824 ABD28619 Endonuclease/exonuclease/phosphatase 7.58E-56 78 519 nuclease activity; nuclease activity;
6436377 MtrDRAFT_AC149130g44v2 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H[Medicago truncatula] download
 
Rhizophora mangle Rmv3_29925 339 124359510 ABD28627 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H 1.90E-11 65 201 nucleic acid binding; catalytic activity; nucleic acid binding; catalytic activity;
6436475 MtrDRAFT_AC174465g13v2 Helicase, C-terminal[Medicago truncatula] download
 
Rhizophora mangle Rmv3_1783 355 124361137 ABN09109 initiation factor eif4a-15 6.91E-22 98 150 ATP-dependent helicase activity; ATP binding; translation initiation factor activity; auxin biosynthetic process; regulation of translational initiation; ribosome; hydrolase activity; nucleotide binding; translation factor activity, nucleic acid binding; biosynthetic process; cellular process; translation; ribosome;
6436539 MtrDRAFT_AC158464g25v2 Bacteriophytochrome[Medicago truncatula] download
 
Rhizophora mangle Rmv3_2963 551 87241383 ABD33241 phytochrome e 9.29E-46 81 414 ATP binding; G-protein coupled photoreceptor activity; protein homodimerization activity; two-component sensor activity; red, far-red light phototransduction; two-component signal transduction system (phosphorelay); sensory perception; protein-tetrapyrrole linkage; peptidyl-histidine phosphorylation; regulation of transcription, DNA-dependent; protein-chromophore linkage; G-protein signaling, coupled to cyclic nucleotide second messenger; membrane; protein histidine kinase complex; nucleotide binding; receptor activity; protein binding; kinase activity; signal transducer activity; response to external stimulus; signal transduction; response to abiotic stimulus; biological_process; protein modification process; transcription; membrane; cellular_component;
6436682 MtrDRAFT_AC148815g1v2 Calcium-binding EF-hand[Medicago truncatula] download
 
Rhizophora mangle Rmv3_12123 254 87240366 ABD32224 calcium-binding ef-hand 1.01E-15 84 156 calcium ion binding; binding;
6436688 MtrDRAFT_AC148815g27v2 SAM (and some other nucleotide) binding motif[Medicago truncatula] download
 
Rhizophora mangle Rmv3_416 484 124359271 ABN05774 sam (and some other nucleotide) binding motif 3.56E-64 84 267 plastid; plastid;
6436775 MtrDRAFT_AC148918g11v2 Leucine-rich repeat; Leucine-rich[Medicago truncatula] download
 
Rhizophora mangle Rmv3_22317 420 87162712 ABD28507 atp binding nucleoside-triphosphatase nucleotide binding protein binding 2.15E-10 49 411 protein binding; protein binding;
6436826 MtrDRAFT_AC155896g43v2 ABC transporter related; Choline dehydrogenase[Medicago truncatula] download
 
Rhizophora mangle Rmv3_14307 256 124360378 ABN08391 hth fad binding aldehyde-lyase mandelonitrile lyase 2.92E-31 91 252 oxidoreductase activity, acting on CH-OH group of donors; FAD binding; mandelonitrile lyase activity; alcohol metabolic process; embryo sac development; cell-cell signaling; fatty acid omega-oxidation; extracellular region; catalytic activity; nucleotide binding; metabolic process; multicellular organismal development; cell-cell signaling; cellular process; lipid metabolic process; extracellular region;
6437305 MtrDRAFT_AC139526g26v2 Protein of unknown function DUF1295[Medicago truncatula] download
 
Rhizophora mangle Rmv3_23459 351 92870996 ABE80157 Protein of unknown function DUF1295 [Medicago truncatula] 3.69E-31 87 267 oxidoreductase activity, acting on the CH-CH group of donors; lipid metabolic process; cytoplasmic membrane-bounded vesicle; integral to membrane; catalytic activity; lipid metabolic process; cytoplasm; membrane;
6437551 MtrDRAFT_AC152184g36v2 Zinc finger, RING-type[Medicago truncatula] download
 
Rhizophora mangle Rmv3_3152 317 124365542 ABN09776 anaphase promoting complex subunit 11 7.39E-35 95 192 ubiquitin-protein ligase activity; zinc ion binding; protein binding; regulation of mitotic cell cycle; protein ubiquitination; catalytic activity; binding; protein binding; cell cycle; protein modification process;
6437870 MtrDRAFT_AC160516g59v2 H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, delta/epsilon subunit[Medicago truncatula] download
 
Rhizophora mangle Rmv3_20456 466 124360831 ABN08803 atp synthase beta subunit 1.01E-60 100 234 hydrogen-exporting ATPase activity, phosphorylative mechanism; hydrogen ion transporting ATP synthase activity, rotational mechanism; ATP binding; proton-transporting ATPase activity, rotational mechanism; plasma membrane ATP synthesis coupled proton transport; auxin biosynthetic process; proton-transporting ATP synthase complex, catalytic core F(1); chloroplast thylakoid membrane; hydrolase activity; transporter activity; nucleotide binding; transport; biosynthetic process; generation of precursor metabolites and energy; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; cellular process; membrane; intracellular; plastid; thylakoid;
6438282 MtrDRAFT_AC150440g7v2 Protein kinase; U box[Medicago truncatula] download
 
Rhizophora mangle Rmv3_28028 316 87240964 ABD32822 Protein kinase; U box 6.25E-34 83 300 ATP binding; ubiquitin-protein ligase activity; protein serine/threonine kinase activity; auxin biosynthetic process; protein amino acid phosphorylation; protein ubiquitination; serine family amino acid metabolic process; ubiquitin ligase complex; nucleotide binding; catalytic activity; kinase activity; biosynthetic process; cellular process; protein modification process; cellular amino acid and derivative metabolic process; intracellular;
6438428 MtrDRAFT_AC157890g32v2 RNA-directed DNA polymerase (Reverse transcriptase)[Medicago truncatula] download
 
Rhizophora mangle Rmv3_22938 360 124360635 ABN08628 rna-directed dna polymerase (reverse transcriptase) 2.50E-11 62 240
6438518 MtrDRAFT_AC148816g3v2 Exostosin-like[Medicago truncatula] download
 
Rhizophora mangle Rmv3_21234 211 87162615 ABD28410 glycosyltransferase-like protein 4.53E-29 92 210 membrane; membrane;
6438571 MtrDRAFT_AC148965g14v2 protein F1K23.6 - , putative[Medicago truncatula] download
 
Rhizophora mangle Rmv3_29585 308 87162736 ABD28531 protein F1K23.6 - , putative 8.01E-18 78 234
6438965 MtrDRAFT_AC149038g24v2 hypothetical protein[Medicago truncatula] download
 
Rhizophora mangle Rmv3_27300 457 87241003 ABD32861 hypothetical protein MtrDRAFT_AC149038g24v2 [Medicago truncatula] 3.26E-11 73 159
6438994 MtrDRAFT_AC150244g22v2 Histone-fold/TFIID-TAF/NF-Y[Medicago truncatula] download
 
Rhizophora mangle Rmv3_16747 446 87240537 ABD32395 protein 1.59E-61 97 321 sequence-specific DNA binding; nucleus; DNA binding; nucleus;
Rhizophora mangle Rmv3_29944 481 87240537 ABD32395 Histone-fold/TFIID-TAF/NF-Y 6.22E-63 94 477 sequence-specific DNA binding; nucleus; DNA binding; nucleus;
6439040 MtrDRAFT_AC172101g21v1 hypothetical protein[Medicago truncatula] download
 
Rhizophora mangle Rmv3_20556 275 124361047 ABN09019 hypothetical protein MtrDRAFT_AC172101g21v1 [Medicago truncatula] 1.52E-08 76 225
6439068 MtrDRAFT_AC150443g18v2 Tetratricopeptide-like helical[Medicago truncatula] download
 
Rhizophora mangle Rmv3_21517 328 87240852 ABD32710 pentatricopeptide repeat-containing protein 2.67E-45 91 327 binding; binding;
6439071 MtrDRAFT_AC150443g15v2 Conserved oligomeric Golgi complex component 4, related[Medicago truncatula] download
 
Rhizophora mangle Rmv3_8276 928 87240849 ABD32707 pentatricopeptide repeat-containing protein 6.04E-144 91 930 vesicle docking; exocytosis; cytoplasm; transport; cellular process; cytoplasm;
6450135 rps19 ribosomal protein S19[Oryza sativa Japonica Group] download
 
Rhizophora mangle Rmv3_10479 248 194033245 YP_002000582 ribosomal protein s19 2.94E-12 75 186 structural constituent of ribosome; RNA binding; translation; ribosome biogenesis; mitochondrial small ribosomal subunit; plastid; structural molecule activity; RNA binding; translation; cellular process; ribosome; mitochondrion; plastid;
6450138 cox3 cytochrome c oxidase subunit 3[Oryza sativa Japonica Group] download
 
Rhizophora mangle Rmv3_19913 670 194033212 YP_002000549 cytochrome c oxidase subunit 3 2.62E-93 93 588 cytochrome-c oxidase activity; mitochondrial electron transport, cytochrome c to oxygen; aerobic respiration; proton transport; mitochondrial respiratory chain complex IV; integral to membrane; catalytic activity; transporter activity; generation of precursor metabolites and energy; transport; membrane; mitochondrion;
6556321 Dere\GG21374 Official Symbol: Dere\GG21374 and Name: GG21374 gene product from transcript GG21374-RA[Drosophila erecta] Dere\GG21374-PA; GG21374; GG21374-PA download
 
Rhizophora mangle Rmv3_17171 524 194940914 XP_001983122 histone h4 7.89E-34 100 219 DNA binding; actin binding; nucleosome assembly; cytoskeleton organization; nucleosome; nucleus; actin cytoskeleton; DNA binding; protein binding; cellular component organization; cellular process; intracellular; nucleus; cytoskeleton;