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Mangrove Transcriptome Database (v3)

Search Genes

Species Gene ID (exact) Locus (exact) Annotation Alternative names
GO Function GO Process GO Component
GO Slim Function GO Slim Process GO Slim Component

Listing Genes

Genes found: 16028

Gene ID Locus Annotation Alternative names Seq
Query: Species Query Name Size GI Accession Short ID E-value Mean Similarity Alignment Length GO Function GO Process GO Component GO Slim Function GO Slim Process GO Slim Component
4350726 Os11g0557900 Os11g0557900[Oryza sativa Japonica Group] hypothetical protein download
 
Rhizophora mangle Rmv3_19327 545 115485903 NP_001068095 at4g01710 t15b16_22 2.07E-49 94 219 calcium ion binding; actin binding; kinase activity; calcium-dependent protein serine/threonine phosphatase activity; multidimensional cell growth; regulation of actin filament polymerization; trichome morphogenesis; protein amino acid dephosphorylation; Arp2/3 protein complex; protein serine/threonine phosphatase complex; binding; protein binding; kinase activity; hydrolase activity; cell growth; cellular component organization; cellular process; anatomical structure morphogenesis; cell differentiation; multicellular organismal development; protein modification process; cytoskeleton; cell;
4351224 Os11g0707000 Os11g0707000[Oryza sativa Japonica Group] hypothetical protein download
 
Rhizophora mangle Rmv3_14999 183 297612474 NP_001068555 ribulose bisphosphate carboxylase oxygenase chloroplast expressed 4.38E-27 100 180 ATP binding; transcription factor activity; regulation of transcription; chloroplast stroma; transcription factor complex; nucleotide binding; transcription factor activity; transcription; plastid; nucleoplasm;
4351612 Os12g0168900 Os12g0168900[Oryza sativa Japonica Group] hypothetical protein download
 
Rhizophora mangle Rmv3_6059 969 115487542 NP_001066258 vacuolar atp synthase 16 kda proteolipid subunit 1.42E-58 99 381 hydrogen ion transmembrane transporter activity; ATP synthesis coupled proton transport; integral to membrane; proton-transporting V-type ATPase, V0 domain; vacuolar membrane; cytoplasmic membrane-bounded vesicle; transporter activity; transport; biosynthetic process; generation of precursor metabolites and energy; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; membrane; vacuole; cytoplasm;
4421826 ndhB NADH dehydrogenase subunit 2[Coffea arabica] download
 
Rhizophora mangle Rmv3_2771 1203 116617152 YP_817527 nadh-plastoquinone oxidoreductase subunit 2 2.08E-156 98 876 quinone binding; NADH dehydrogenase (ubiquinone) activity; photosynthesis, light reaction; mitochondrial electron transport, NADH to ubiquinone; ubiquinone biosynthetic process; sodium ion transport; proton transport; integral to membrane; chloroplast thylakoid membrane; binding; catalytic activity; generation of precursor metabolites and energy; photosynthesis; biosynthetic process; cellular process; transport; membrane; plastid; thylakoid;
4492859 APECO1_2466 hypothetical protein[Escherichia coli APEC O1] download
 
Rhizophora mangle Rmv3_28073 318 115515395 ABJ03470 conserved hypothetical protein 2.07E-42 94 252 hydrolase activity; hydrolase activity;
4884300 BURPS668_0950 hypothetical protein[Burkholderia pseudomallei 668] download
 
Rhizophora mangle Rmv3_26105 747 126439051 YP_001058001 hypothetical protein BURPS668_0950 [Burkholderia pseudomallei 668] 1.19E-10 37 624
4929628 rps12 ribosomal protein S12[Populus trichocarpa] download
 
4929657 Poptr_cp018 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_16346 519 134093195 YP_001109497 photosystem ii protein z 4.38E-36 80 315 photosystem II stabilization; photosystem II reaction center; integral to membrane; chloroplast thylakoid membrane; generation of precursor metabolites and energy; photosynthesis; membrane; thylakoid; plastid;
4929675 atpE ATP synthase CF1 epsilon subunit[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_19257 364 134093205 YP_001109507 atp synthase epsilon subunit 1.96E-32 97 264 hydrogen ion transporting ATP synthase activity, rotational mechanism; ATP binding; proton-transporting ATPase activity, rotational mechanism; plasma membrane ATP synthesis coupled proton transport; proton-transporting ATP synthase complex, catalytic core F(1); chloroplast thylakoid membrane; transporter activity; nucleotide binding; hydrolase activity; transport; biosynthetic process; generation of precursor metabolites and energy; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; membrane; intracellular; plastid; thylakoid;
4929717 ycf2 Ycf2[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_15056 1210 134093244 YP_001109545 ycf2 0 97 1209 ATP binding; nucleoside-triphosphatase activity; auxin biosynthetic process; chloroplast stroma; nucleotide binding; hydrolase activity; biosynthetic process; cellular process; plastid;
Rhizophora mangle Rmv3_15095 1393 134093244 YP_001109545 ycf2 0 97 1407 ATP binding; nucleoside-triphosphatase activity; auxin biosynthetic process; chloroplast stroma; nucleotide binding; hydrolase activity; biosynthetic process; cellular process; plastid;
Rhizophora mangle Rmv3_19364 394 134093244 YP_001109545 ycf2 2.97E-68 98 390 ATP binding; nucleoside-triphosphatase activity; auxin biosynthetic process; chloroplast stroma; nucleotide binding; hydrolase activity; biosynthetic process; cellular process; plastid;
4929732 Poptr_cp075 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_15164 1342 134093252 YP_001109553 protein 6.83E-34 97 213 chloroplast; plastid;
4929748 Poptr_cp087 Ycf1[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_26242 551 134093264 YP_001109565 rf1 protein 1.48E-59 78 531 chloroplast membrane; integral to membrane; membrane; plastid;
4961978 psaA photosystem I P700 chlorophyll a apoprotein A1[Lepidium virginicum] download
 
Rhizophora mangle Rmv3_30600 328 139388910 YP_001123637 psi p700 apoprotein a1 1.90E-59 100 324 electron carrier activity; magnesium ion binding; chlorophyll binding; 4 iron, 4 sulfur cluster binding; transport; protein-chromophore linkage; photosynthesis; electron transport chain; electron transport; plastoglobule; photosystem I reaction center; integral to membrane; chloroplast thylakoid membrane; molecular_function; binding; transport; protein modification process; photosynthesis; generation of precursor metabolites and energy; plastid; membrane; thylakoid;
4962721 orf133 hypothetical protein[Crucihimalaya wallichii] download
 
Rhizophora mangle Rmv3_8655 1210 134286711 BAF50334 hypothetical chloroplast rf68 5.10E-47 96 240 mitochondrion; chloroplast; mitochondrion; plastid;
4962724 orf133 hypothetical protein[Crucihimalaya wallichii] download
 
5000229 Bip Luminal binding protein precursor, probable[Ostreococcus lucimarinus CCE9901] download
 
5048583 PikoCp460 ORF124[Pinus koraiensis] download
 
Rhizophora mangle Rmv3_6673 476 145408590 YP_001152214 23s ribosomal rna 3.02E-27 93 138 ribosome; chloroplast; ribosome; plastid;
5236500 petD cytochrome b6/f complex subunit IV[Chloranthus spicatus] download
 
Rhizophora mangle Rmv3_27369 408 149390298 YP_001294129 cytochrome b6 f complex subunit iv 1.36E-41 94 279 oxidoreductase activity; electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity; photosynthetic electron transport in cytochrome b6/f; transport; respiratory electron transport chain; electron transport; integral to membrane; chloroplast thylakoid membrane; catalytic activity; molecular_function; generation of precursor metabolites and energy; photosynthesis; transport; membrane; plastid; thylakoid;
5236840 rpl33 ribosomal protein L33[Buxus microphylla] download
 
Rhizophora mangle Rmv3_8876 832 149390561 YP_001294205 ribosomal protein l33 2.27E-27 92 198 structural constituent of ribosome; translation; ribosome biogenesis; ribosome; chloroplast; structural molecule activity; translation; cellular process; ribosome; plastid;
5503522 NEMVEDRAFT_v1g133405 hypothetical protein[Nematostella vectensis] download
 
Rhizophora mangle Rmv3_28511 353 156358531 XP_001624571 predicted protein 7.34E-19 74 237
5520463 NEMVEDRAFT_v1g84648 hypothetical protein[Nematostella vectensis] download
 
Rhizophora mangle Rmv3_27446 361 156404195 XP_001640293 protein 2.19E-07 57 291
5651512 LmjF20.1650 ribosomal protein s11 homolog[Leishmania major strain Friedlin] download
 
5724366 AMI2 amidase[Chlamydomonas reinhardtii] download
 
5724504 CHLREDRAFT_155068 hypothetical protein[Chlamydomonas reinhardtii] download
 
Rhizophora mangle Rmv3_20937 125 159481769 XP_001698950 hypothetical protein CHLREDRAFT_155068 [Chlamydomonas reinhardtii] 6.88E-09 81 111
5727210 UROD2 uroporphyrinogen decarboxylase[Chlamydomonas reinhardtii] download
 
Rhizophora mangle Rmv3_22138 703 159487233 XP_001701638 uroporphyrinogen decarboxylase chloroplast precursor 9.34E-63 80 354 uroporphyrinogen decarboxylase activity; porphyrin biosynthetic process; chlorophyll metabolic process; cytoplasm; catalytic activity; biosynthetic process; cellular process; metabolic process; cytoplasm;