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Mangrove Transcriptome Database (v3)

Search Genes

Species Gene ID (exact) Locus (exact) Annotation Alternative names
GO Function GO Process GO Component
GO Slim Function GO Slim Process GO Slim Component

Listing Genes

Genes found: 16028

Gene ID Locus Annotation Alternative names Seq
Query: Species Query Name Size GI Accession Short ID E-value Mean Similarity Alignment Length GO Function GO Process GO Component GO Slim Function GO Slim Process GO Slim Component
3772829 ycf3 photosystem I assembly protein Ycf3[Lactuca sativa] download
 
Rhizophora mangle Rmv3_18804 364 81176251 YP_398330 photosystem i assembly protein ycf3 3.58E-32 100 171 unfolded protein binding; photosystem I assembly; plastid membrane; chloroplast thylakoid membrane; protein binding; cellular component organization; generation of precursor metabolites and energy; photosynthesis; membrane; plastid; thylakoid;
3772858 ndhH NADH dehydrogenase 49 kDa subunit[Lactuca sativa] NADH dehydrogenase subunit 7 download
 
Rhizophora mangle Rmv3_28744 391 81176307 YP_398384 NADH dehydrogenase subunit 7 3.08E-70 97 390 NAD or NADH binding; quinone binding; oxidoreductase activity, acting on NADH or NADPH; transport; oxidation reduction; photosynthesis, light reaction; chloroplast thylakoid membrane; nucleotide binding; binding; catalytic activity; transport; metabolic process; generation of precursor metabolites and energy; photosynthesis; membrane; plastid; thylakoid;
3800048 orf173 orf173[Triticum aestivum] download
 
Rhizophora mangle Rmv3_21306 1511 81176529 YP_398413 mitchondrion orf173 8.04E-26 60 519 NADH dehydrogenase (ubiquinone) activity; mitochondrial electron transport, NADH to ubiquinone; ubiquinone biosynthetic process; sodium ion transport; proton transport; respiratory chain complex I; mitochondrion; catalytic activity; generation of precursor metabolites and energy; biosynthetic process; cellular process; transport; membrane; intracellular; mitochondrion;
3890472 ccb382 cytochrome c biogenesis orf382[Arabidopsis thaliana] download
 
3950693 nad4L NADH dehydrogenase subunit 4L[Oryza sativa Indica Group] download
 
Rhizophora mangle Rmv3_15285 1324 89280726 YP_514666 nadh dehydrogenase subunit 4l 1.27E-32 97 300 NADH dehydrogenase (ubiquinone) activity; mitochondrial electron transport, NADH to ubiquinone; ubiquinone biosynthetic process; sodium ion transport; proton transport; mitochondrial respiratory chain complex I; catalytic activity; generation of precursor metabolites and energy; biosynthetic process; cellular process; transport; membrane; mitochondrion;
3989051 cox1 cytochrome c oxidase subunit 1[Physcomitrella patens] download
 
Rhizophora mangle Rmv3_6172 1743 171259158 YP_539000 cytochrome c oxidase subunit 1 0 99 735 copper ion binding; electron carrier activity; heme binding; cytochrome-c oxidase activity; aerobic respiration; electron transport; mitochondrial electron transport, cytochrome c to oxygen; proton transport; mitochondrial inner membrane; plasma membrane; integral to membrane; respiratory chain complex IV; binding; molecular_function; catalytic activity; transporter activity; generation of precursor metabolites and energy; transport; membrane; mitochondrion; plasma membrane; intracellular;
3989160 ycf4 photosystem I assembly protein Ycf4[Gossypium hirsutum] download
 
Rhizophora mangle Rmv3_17944 485 91208913 YP_538946 photosystem i assembly protein ycf4 3.63E-58 97 345 photosynthesis; integral to membrane; chloroplast thylakoid membrane; photosynthesis; membrane; plastid; thylakoid;
4012464 Bpro_4852 acyl-CoA dehydrogenase-like protein[Polaromonas sp. JS666] download
 
Rhizophora mangle Rmv3_11622 231 91790674 YP_551626 acyl- dehydrogenase 5.29E-17 67 243 acyl-CoA dehydrogenase activity; oxidation reduction; electron transport; catalytic activity; metabolic process;
4025043 ndhI NADH dehydrogenase 18 kDa subunit[Vitis vinifera] NADH dehydrogenase subunit I download
 
Rhizophora mangle Rmv3_4927 1549 91984047 YP_567132 nadh dehydrogenase subunit i 1.54E-88 96 489 quinone binding; electron carrier activity; NADH dehydrogenase (ubiquinone) activity; iron ion binding; 4 iron, 4 sulfur cluster binding; photosynthesis, light reaction; electron transport; mitochondrial electron transport, NADH to ubiquinone; ubiquinone biosynthetic process; sodium ion transport; proton transport; chloroplast thylakoid membrane; binding; molecular_function; catalytic activity; generation of precursor metabolites and energy; photosynthesis; biosynthetic process; cellular process; transport; membrane; thylakoid; plastid;
4025049 cemA heme-binding protein[Vitis vinifera] envelope membrane protein download
 
Rhizophora mangle Rmv3_20360 585 91984004 YP_567088 envelope membrane protein 6.18E-69 98 342 hydrogen ion transmembrane transporter activity; proton transport; integral to membrane; chloroplast inner membrane; transporter activity; transport; membrane; plastid;
4055823 orf99-a1 hypothetical protein[Zea mays subsp. mays] download
 
Rhizophora mangle Rmv3_31398 345 94502696 YP_588283 hypothetical protein ZeamMp018 [Zea mays subsp. mays] 1.40E-23 98 162 mitochondrion; mitochondrion;
4055854 orf111-b hypothetical protein[Zea mays subsp. mays] download
 
Rhizophora mangle Rmv3_20222 380 94502665 YP_588403 hypothetical protein ZeamMp158 [Zea mays subsp. mays] 7.60E-07 77 108
4108450 ORF113 hypothetical protein[Eucalyptus globulus subsp. globulus] download
 
Rhizophora mangle Rmv3_31507 453 108802688 YP_636345 ycf68_eucgg ame: full=uncharacterized protein ycf68 ame: full=orf113 6.57E-20 80 201 chloroplast; plastid;
4126880 atpI ATPase IV subunit[Oryza sativa Indica Group] ATP synthase CF0 A subunit download
 
Rhizophora mangle Rmv3_4361 1671 42795483 AAS46050 atp synthase cf0 subunit iv protein 9.54E-124 93 804 hydrogen ion transporting ATP synthase activity, rotational mechanism; plasma membrane ATP synthesis coupled proton transport; integral to membrane; proton-transporting ATP synthase complex, coupling factor F(o); chloroplast thylakoid membrane; transporter activity; transport; generation of precursor metabolites and energy; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; biosynthetic process; membrane; intracellular; plastid; thylakoid;
4178224 clpP ATP-dependent Clp protease proteolytic subunit[Populus alba] download
 
Rhizophora mangle Rmv3_20207 480 110227104 YP_665583 atp-dependent clp protease proteolytic subunit 1.49E-32 96 225 serine-type endopeptidase activity; ATP binding; proteolysis; chloroplast; hydrolase activity; nucleotide binding; protein metabolic process; catabolic process; plastid;
4178263 rps19 30S ribosomal protein S19[Populus alba] ribosomal protein S19 download
 
Rhizophora mangle Rmv3_22487 345 110227119 YP_665598 ribosomal protein s19 2.36E-41 96 270 structural constituent of ribosome; rRNA binding; translation; ribosome biogenesis; small ribosomal subunit; chloroplast; mitochondrion; structural molecule activity; RNA binding; translation; cellular process; ribosome; plastid; mitochondrion;
4237918 orf116 hypothetical protein[Brassica napus] download
 
Rhizophora mangle Rmv3_24705 764 112253905 YP_717160 nadh-ubiquinone oxidoreductase 2.12E-42 95 249 NADH dehydrogenase (ubiquinone) activity; mitochondrial electron transport, NADH to ubiquinone; ubiquinone biosynthetic process; sodium ion transport; proton transport; mitochondrion; catalytic activity; generation of precursor metabolites and energy; biosynthetic process; cellular process; transport; mitochondrion;
4271129 petB cytochrome b6[Citrus sinensis] download
 
Rhizophora mangle Rmv3_4496 902 114329685 YP_740506 cytochrome b6 6.01E-125 99 669 metal ion binding; oxidoreductase activity; electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity; transport; respiratory electron transport chain; photosynthesis; electron transport; integral to membrane; chloroplast thylakoid membrane; binding; catalytic activity; molecular_function; transport; generation of precursor metabolites and energy; photosynthesis; membrane; plastid; thylakoid;
Rhizophora mangle Rmv3_13415 799 114329685 YP_740506 cytochrome b6 6.12E-120 98 663 metal ion binding; oxidoreductase activity; electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity; transport; respiratory electron transport chain; photosynthesis; electron transport; integral to membrane; chloroplast thylakoid membrane; binding; catalytic activity; molecular_function; transport; generation of precursor metabolites and energy; photosynthesis; membrane; plastid; thylakoid;
4324700 Os01g0719700 Os01g0719700[Oryza sativa Japonica Group] hypothetical protein download
 
Rhizophora mangle Rmv3_27245 566 297597515 NP_001044086 hcf101 (high-chlorophyll-fluorescence 101) atp binding 3.26E-60 98 411 ATP binding; oxidation reduction; nucleotide binding; metabolic process;
4326221 Os01g0176300 Os01g0176300[Oryza sativa Japonica Group] hypothetical protein download
 
Rhizophora mangle Rmv3_23105 390 115434844 NP_001042180 Os01g0176300 [Oryza sativa Japonica Group] 3.13E-22 68 327 binding; mitochondrion; binding; mitochondrion;
4326511 Os01g0939500 Os01g0939500[Oryza sativa Japonica Group] hypothetical protein download
 
Rhizophora mangle Rmv3_16006 135 115442139 NP_001045349 eukaryotic release factor 1-1 1.37E-17 100 132 translation release factor activity; regulation of translational termination; ribosome; translation release factor complex; translation factor activity, nucleic acid binding; cellular component organization; translation; ribosome; cytoplasm;
4326829 Os01g0934000 Os01g0934000[Oryza sativa Japonica Group] hypothetical protein download
 
Rhizophora mangle Rmv3_5931 468 115442055 NP_001045307 at3g62770 f26k9_200 1.83E-26 74 249 response to starvation; senescence; autophagy; plastid; response to extracellular stimulus; response to stress; biological_process; catabolic process; cellular process; plastid;
4327193 Os01g0229100 Os01g0229100[Oryza sativa Japonica Group] hypothetical protein download
 
Rhizophora mangle Rmv3_3165 1792 115435450 NP_001042483 eukaryotic translation initiation factor 3 subunit 6 interacting protein 0 87 921 plasma membrane; plasma membrane;
Rhizophora mangle Rmv3_23305 1268 115435450 NP_001042483 eukaryotic translation initiation factor 3 subunit 6 interacting protein 2.92E-151 88 603 plasma membrane; plasma membrane;
4327330 Os01g0197200 Os01g0197200[Oryza sativa Japonica Group] hypothetical protein download
 
Rhizophora mangle Rmv3_16032 267 56201870 BAD73320 dead box atp-dependent rna 6.66E-37 94 234 ATP-dependent helicase activity; nucleic acid binding; ATP binding; auxin biosynthetic process; hydrolase activity; nucleic acid binding; nucleotide binding; biosynthetic process; cellular process;
4327709 Os01g0254100 Os01g0254100[Oryza sativa Japonica Group] hypothetical protein download
 
Rhizophora mangle Rmv3_31265 488 115435716 NP_001042616 tpl protein binding protein homodimerization transcription repressor 3.96E-81 97 486 protein homodimerization activity; transcription repressor activity; primary shoot apical meristem specification; jasmonic acid mediated signaling pathway; xylem and phloem pattern formation; response to auxin stimulus; negative regulation of transcription; cytosol; transcriptional repressor complex; protein binding; transcription regulator activity; reproduction; anatomical structure morphogenesis; post-embryonic development; embryonic development; signal transduction; response to endogenous stimulus; multicellular organismal development; transcription; cytosol; nucleoplasm;