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Mangrove Transcriptome Database (v3)

Search Genes

Species Gene ID (exact) Locus (exact) Annotation Alternative names
GO Function GO Process GO Component
GO Slim Function GO Slim Process GO Slim Component

Listing Genes

Genes found: 16028

Gene ID Locus Annotation Alternative names Seq
Query: Species Query Name Size GI Accession Short ID E-value Mean Similarity Alignment Length GO Function GO Process GO Component GO Slim Function GO Slim Process GO Slim Component
395566 AMT aminomethyltransferase[Gallus gallus] GCVT; T-protein; aminomethyltransferase, mitochondrial; glycine cleavage system T protein download
 
Rhizophora mangle Rmv3_8179 275 45382157 NP_990119 mitochondrial precursor 9.17E-22 75 264 methyltransferase activity; cytoplasm; transferase activity; cytoplasm;
488275 LOC488275 histone H3.1-like[Canis lupus familiaris] download
 
Rhizophora mangle Rmv3_20079 742 74004208 XP_545397 histone h3 type 2 2.33E-59 94 441 DNA binding; nucleosome assembly; nucleosome; nucleus; plastid; DNA binding; cellular component organization; cellular process; intracellular; nucleus; plastid;
541675 tip1 Official Symbol: tip1 and Name: tonoplast intrinsic protein1[Zea mays] PCO114899; PCO114899(749); PCO114899_ov; ZmTIP1-1; aquaporin TIP1-1; tonoplast intrinsic protein 1-1; zmTIP1;1 download
 
Rhizophora mangle Rmv3_31355 404 162459183 NP_001104896 tonoplast intrinsic protein 2.76E-50 83 402 transporter activity; transmembrane transport; vacuolar membrane; integral to membrane; transporter activity; transport; cellular process; membrane; vacuole;
542583 gpn1 Official Symbol: gpn1 and Name: glyceraldehyde-3-phosphate deHaseN1[Zea mays] CL2087_1; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; gapn1; glyceraldehyde-3-phosphate dehydrogenase; non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase; triosephosphate dehydrogenase download
 
Rhizophora mangle Rmv3_12951 495 164414441 NP_001105589 glyceraldehyde-3-phosphate dehydrogenase 2.47E-29 95 123 glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity; oxidation reduction; glycolysis; cytoplasm; catalytic activity; metabolic process; carbohydrate metabolic process; generation of precursor metabolites and energy; catabolic process; cytoplasm;
542934 LOC542934 ribosomal Pr 117[Triticum aestivum] download
 
Rhizophora mangle Rmv3_21013 743 32400871 AAP80667 60s ribosomal protein l23 2.57E-74 100 420 structural constituent of ribosome; translation; ribosome biogenesis; ribosome; mitochondrion; structural molecule activity; translation; cellular process; ribosome; mitochondrion;
543645 LOC543645 dicyanin[Solanum lycopersicum] download
 
Rhizophora mangle Rmv3_32891 404 7670832 AAF66242 cucumber peeling 3.17E-30 73 300 transcription regulator activity; transcription regulator activity; transcription regulator activity; binding; molecular_function;
543719 PYD1A PYD1A protein[Solanum lycopersicum] download
 
Rhizophora mangle Rmv3_2599 458 24850453 AAN64920 jpr orf1 1.25E-38 95 210 dihydroorotate oxidase activity; dihydropyrimidine dehydrogenase (NADP+) activity; UMP biosynthetic process; oxidation reduction; 'de novo' pyrimidine base biosynthetic process; pantothenate biosynthetic process; beta-alanine metabolic process; cytoplasm; catalytic activity; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; biosynthetic process; metabolic process; cellular amino acid and derivative metabolic process; cytoplasm;
543761 vp1.1 vacuolar-type H+-pyrophosphatase[Solanum lycopersicum] download
 
Rhizophora mangle Rmv3_26288 350 14149007 CAC39165 pyrophosphate-energized vacuolar membrane proton 4.02E-33 100 216 inorganic diphosphatase activity; hydrogen-translocating pyrophosphatase activity; 2-alkenal reductase activity; oxidation reduction; proton transport; oxidative phosphorylation; membrane; hydrolase activity; transporter activity; catalytic activity; metabolic process; transport; generation of precursor metabolites and energy; membrane;
543815 LOC543815 uncharacterized LOC543815[Solanum lycopersicum] uncharacterized protein LOC543815 download
 
Rhizophora mangle Rmv3_12046 216 10567808 AAG16758 glutathione s- 6.11E-18 82 171 glutathione transferase activity; toxin catabolic process; glutathione metabolic process; glutathione conjugation reaction; cytoplasm; transferase activity; catabolic process; cellular process; secondary metabolic process; cellular amino acid and derivative metabolic process; cytoplasm;
Rhizophora mangle Rmv3_12368 943 10567808 AAG16758 glutathione s- 1.15E-66 85 321 lyase activity; transferase activity; protein binding; catalytic activity; transferase activity; protein binding;
543849 PP5 type 5 serine/threonine phosphatase 55 kDa isoform[Solanum lycopersicum] Serine/threonine protein phosphatase 5; serine/threonine-protein phosphatase 5 download
 
Rhizophora mangle Rmv3_14287 629 75146761 Q84K11 type 5 protein serine threonine phosphatase 62 kda isoform 2.89E-48 95 330 phospholipase C activity; metal ion binding; protein serine/threonine phosphatase activity; protein binding; protein amino acid dephosphorylation; nucleocytoplasmic transport; red or far-red light signaling pathway; phospholipid catabolic process; integral to endoplasmic reticulum membrane; nuclear membrane; nuclear speck; protein serine/threonine phosphatase complex; hydrolase activity; binding; protein binding; protein modification process; transport; cellular process; signal transduction; response to abiotic stimulus; catabolic process; lipid metabolic process; membrane; endoplasmic reticulum; nuclear envelope; nucleoplasm; cell;
543868 NRAMP1 root-specific metal transporter[Solanum lycopersicum] download
 
Rhizophora mangle Rmv3_30885 886 30267434 AAP21818 nramp transporter 4.63E-114 93 885 transporter activity; transport; membrane; transporter activity; transport; membrane;
544068 PGH1 enolase[Solanum lycopersicum] 2-phospho-D-glycerate hydro-lyase; 2-phosphoglycerate dehydratase; protein converts 2-phosphoglycerate to phosphoenolpyruvate, binds magnesium, located in cytoplasm download
 
Rhizophora mangle Rmv3_27485 469 119354 P26300 eno_sollc ame: full=enolase ame: full=2-phospho-d-glycerate hydro-lyase ame: full=2-phosphoglycerate dehydratase 3.70E-79 96 468 acyltransferase activity; phosphopyruvate hydratase activity; magnesium ion binding; glycolysis; acyl-carrier-protein biosynthetic process; tryptophan biosynthetic process; gluconeogenesis; tyrosine biosynthetic process; L-phenylalanine biosynthetic process; cell surface; phosphopyruvate hydratase complex; transferase activity; catalytic activity; binding; carbohydrate metabolic process; generation of precursor metabolites and energy; catabolic process; biosynthetic process; cellular amino acid and derivative metabolic process; cellular process; cell; cytosol;
544106 LOC544106 glycolate oxidase[Solanum lycopersicum] download
 
Rhizophora mangle Rmv3_3002 556 1063400 CAA63482 #NAME? 1.03E-31 97 222 glycolate oxidase activity; FMN binding; oxidation reduction; cytosolic ribosome; peroxisome; chloroplast stroma; membrane; nucleus; apoplast; glycolate oxidase complex; catalytic activity; nucleotide binding; metabolic process; ribosome; peroxisome; plastid; membrane; nucleus; extracellular region; cytoplasm;
544309 LOC544309 involved in inorganic sulfate assimilation[Solanum lycopersicum] download
 
Rhizophora mangle Rmv3_17918 332 51457946 AAU03362 na+ dependent ileal bile acid transporter 3.22E-32 93 132 bile acid:sodium symporter activity; organic anion transport; sodium ion transport; bile acid and bile salt transport; chloroplast envelope; integral to membrane; transporter activity; transport; plastid; membrane;
547544 LOC547544 SNF-1-like serine/threonine protein kinase[Glycine max] expressed in nodules, roots and leaves download
 
Rhizophora mangle Rmv3_23243 369 4567091 AAD23582 akin10 (arabidopsis snf1 kinase homolog 10) protein binding protein kinase 2.07E-45 92 300 ATP binding; protein binding; calmodulin-dependent protein kinase activity; auxin biosynthetic process; primary root development; senescence; reproductive developmental process; vegetative phase change; detection of nutrient; abscisic acid mediated signaling pathway; sugar mediated signaling pathway; response to stress; protein amino acid phosphorylation; serine family amino acid metabolic process; nuclear ubiquitin ligase complex; nucleotide binding; protein binding; kinase activity; biosynthetic process; cellular process; multicellular organismal development; biological_process; reproduction; post-embryonic development; response to extracellular stimulus; signal transduction; response to endogenous stimulus; response to stress; protein modification process; cellular amino acid and derivative metabolic process; nucleus;
547558 PM37 seed maturation protein PM37[Glycine max] DnaJ protein download
 
Rhizophora mangle Rmv3_5979 1697 5802244 AAD51625 chaperone protein 0 93 1254 metal ion binding; heat shock protein binding; ATP binding; unfolded protein binding; protein folding; response to heat; cytoplasm; binding; protein binding; nucleotide binding; protein metabolic process; cellular process; response to stress; response to abiotic stimulus; cytoplasm;
Rhizophora mangle Rmv3_7321 1105 5802244 AAD51625 dnaj protein homolog atj3 1.12E-69 95 414 metal ion binding; heat shock protein binding; ATP binding; unfolded protein binding; protein folding; response to heat; cytoplasm; plasma membrane; cell wall; binding; protein binding; nucleotide binding; protein metabolic process; cellular process; response to stress; response to abiotic stimulus; cytoplasm; plasma membrane; cell wall;
Rhizophora mangle Rmv3_19164 611 5802244 AAD51625 af169022_1seed maturation protein pm37 6.24E-90 95 618 metal ion binding; heat shock protein binding; ATP binding; unfolded protein binding; protein folding; response to heat; cytoplasm; binding; protein binding; nucleotide binding; protein metabolic process; cellular process; response to stress; response to abiotic stimulus; cytoplasm;
Rhizophora mangle Rmv3_30200 405 5802244 AAD51625 chaperone protein 5.58E-27 100 177 metal ion binding; heat shock protein binding; ATP binding; unfolded protein binding; protein folding; response to heat; cytoplasm; binding; protein binding; nucleotide binding; protein metabolic process; cellular process; response to stress; response to abiotic stimulus; cytoplasm;
547616 MAPK2 mitogen-activated protein kinase 2[Glycine max] detectable by peptide-specific anti-MMK1 antiserum download
 
Rhizophora mangle Rmv3_24051 496 33340593 AAQ14867 big map kinase 1.81E-86 96 495 MAP kinase activity; ATP binding; auxin biosynthetic process; protein amino acid phosphorylation; cell cycle; transmembrane receptor protein serine/threonine kinase signaling pathway; serine family amino acid metabolic process; kinase activity; signal transducer activity; nucleotide binding; biosynthetic process; cellular process; protein modification process; cell cycle; signal transduction; cellular amino acid and derivative metabolic process;
547626 ACX1;2 acyl-CoA oxidase[Glycine max] download
 
Rhizophora mangle Rmv3_17408 223 15553480 AAL01888 acyl- oxidase 2.23E-31 97 219 acyl-CoA dehydrogenase activity; FAD binding; acyl-CoA oxidase activity; oxidation reduction; fatty acid beta-oxidation; electron transport; acyl-CoA metabolic process; peroxisome; catalytic activity; nucleotide binding; metabolic process; catabolic process; cellular process; lipid metabolic process; peroxisome;
547630 LOC547630 adenosine 5'-phosphosulfate reductase[Glycine max] download
 
Rhizophora mangle Rmv3_31943 308 18252504 AAL66290 adenylyl-sulfate reductase 3.45E-45 96 303 adenylyl-sulfate reductase (glutathione) activity; transferase activity; phosphoadenylyl-sulfate reductase (thioredoxin) activity; cell redox homeostasis; oxidation reduction; cysteine biosynthetic process; sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin); catalytic activity; transferase activity; cellular homeostasis; metabolic process; biosynthetic process; cellular amino acid and derivative metabolic process; cellular process;
547643 LOC547643 methionine synthase[Glycine max] download
 
Rhizophora mangle Rmv3_26119 333 33325957 AAQ08403 at5g17920 mpi7_60 7.20E-43 100 330 copper ion binding; methionine synthase activity; zinc ion binding; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity; methionine biosynthetic process; response to salt stress; response to zinc ion; cytosol; peroxisome; chloroplast stroma; plasma membrane; apoplast; binding; transferase activity; biosynthetic process; cellular amino acid and derivative metabolic process; response to stress; response to abiotic stimulus; biological_process; cytosol; peroxisome; plastid; plasma membrane; extracellular region;
547645 LOC547645 40S ribosomal S4 protein[Glycine max] download
 
Rhizophora mangle Rmv3_21596 290 22138108 AAM93434 40s ribosomal protein s4 1.03E-28 96 198 structural constituent of ribosome; rRNA binding; translation; ribosome biogenesis; ribosome; structural molecule activity; RNA binding; translation; cellular process; ribosome;
547655 LOC547655 small GTP-binding protein[Glycine max] download
 
Rhizophora mangle Rmv3_9585 1090 22597172 AAN03473 small gtp-binding protein 4.39E-102 94 654 hydrolase activity; GTP binding; protein transport; small GTPase mediated signal transduction; plasma membrane; hydrolase activity; nucleotide binding; transport; signal transduction; plasma membrane;
547676 AT-1SNBP HMG I/Y like protein[Glycine max] download
 
Rhizophora mangle Rmv3_24251 393 15706274 CAC69997 histone h1 3.80E-23 74 261 DNA binding; DNA mediated transformation; nucleosome assembly; nucleolus; nucleosome; DNA binding; biological_process; cellular component organization; cellular process; nucleolus; intracellular;
547684 bmy1 beta-amylase[Glycine max] download
 
Rhizophora mangle Rmv3_18598 116 59668410 CAI39245 af402598_1 beta-amylase bmy3 3.01E-12 94 114 beta-amylase activity; cation binding; polysaccharide catabolic process; starch metabolic process; sucrose metabolic process; hydrolase activity; binding; carbohydrate metabolic process; catabolic process; cellular process;
547693 sir ferredoxin:sulfite reductase precursor[Glycine max] download
 
Rhizophora mangle Rmv3_27347 311 12658639 AAG59996 sulfite reductase 3.68E-39 96 309 copper ion binding; sulfite reductase (ferredoxin) activity; heme binding; sulfite reductase activity; 4 iron, 4 sulfur cluster binding; response to cold; oxidation reduction; sulfate reduction; response to salt stress; stromule; chloroplast stroma; membrane; apoplast; binding; catalytic activity; response to stress; response to abiotic stimulus; metabolic process; cellular process; plastid; membrane; extracellular region;
Rhizophora mangle Rmv3_32848 328 12658639 AAG59996 sulfite reductase 1.52E-16 72 306 transcription regulator activity; transcription regulator activity; catalytic activity; binding;