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Mangrove Transcriptome Database (v3)

Search Genes

Species Gene ID (exact) Locus (exact) Annotation Alternative names
GO Function GO Process GO Component
GO Slim Function GO Slim Process GO Slim Component

Listing Genes

Genes found: 16028

Gene ID Locus Annotation Alternative names Seq
Query: Species Query Name Size GI Accession Short ID E-value Mean Similarity Alignment Length GO Function GO Process GO Component GO Slim Function GO Slim Process GO Slim Component
5878386 ycf2 Ycf2[Carica papaya] download
 
Rhizophora mangle Rmv3_19690 176 167391849 YP_001671726 ycf2 5.72E-24 96 174 ATP binding; nucleoside-triphosphatase activity; auxin biosynthetic process; chloroplast stroma; nucleotide binding; hydrolase activity; biosynthetic process; cellular process; plastid;
5878388 rpoC1 RNA polymerase beta' subunit[Carica papaya] download
 
Rhizophora mangle Rmv3_31122 431 167391796 YP_001671674 rna polymerase beta subunit protein 4.21E-67 92 429 DNA-directed RNA polymerase activity; DNA binding; transcription, DNA-dependent; purine base metabolic process; pyrimidine base metabolic process; chloroplast; nucleolus; transferase activity; DNA binding; transcription; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; plastid; nucleolus;
5917792 PHYPADRAFT_175763 hypothetical protein[Physcomitrella patens subsp. patens] download
 
Rhizophora mangle Rmv3_1818 1246 168003848 XP_001754624 cation-chloride cotransporter 2.00E-132 81 666 cation:chloride symporter activity; transmembrane transport; sodium ion transport; chloride transport; integral to membrane; transporter activity; transport; cellular process; membrane;
5918842 PHYPADRAFT_204131 hypothetical protein[Physcomitrella patens subsp. patens] download
 
Rhizophora mangle Rmv3_20006 169 168005694 XP_001755545 atp-dependent rna 5.76E-24 100 165 ATP-dependent helicase activity; nucleic acid binding; ATP binding; auxin biosynthetic process; hydrolase activity; nucleic acid binding; nucleotide binding; biosynthetic process; cellular process;
5922496 PHYPADRAFT_121394 hypothetical protein[Physcomitrella patens subsp. patens] download
 
Rhizophora mangle Rmv3_4597 1959 168013278 XP_001759328 protein phosphatases pp1 regulatory 0 66 927
5930647 PHYPADRAFT_186444 hypothetical protein[Physcomitrella patens subsp. patens] download
 
Rhizophora mangle Rmv3_17388 951 168029807 XP_001767416 eukaryotic translation initiation factor 5 8.19E-77 94 321 translation initiation factor activity; regulation of translational initiation; ribosome; translation factor activity, nucleic acid binding; translation; ribosome;
5932672 PHYPADRAFT_166353 hypothetical protein[Physcomitrella patens subsp. patens] download
 
Rhizophora mangle Rmv3_6467 653 168033844 XP_001769424 phosphatidylinositol-glycan class 6.88E-25 65 192 GPI anchor biosynthetic process; endoplasmic reticulum membrane; integral to membrane; biosynthetic process; protein modification process; lipid metabolic process; membrane; endoplasmic reticulum;
5933074 PHYPADRAFT_215726 hypothetical protein[Physcomitrella patens subsp. patens] download
 
Rhizophora mangle Rmv3_22446 659 168034606 XP_001769803 protein 9.72E-70 88 402 unfolded protein binding; ATP binding; protein folding; response to stress; cytoplasm; protein binding; nucleotide binding; protein metabolic process; cellular process; response to stress; cytoplasm;
5940141 PHYPADRAFT_169569 hypothetical protein[Physcomitrella patens subsp. patens] download
 
Rhizophora mangle Rmv3_2166 360 168048963 XP_001776934 ornithine carbamoyltransferase 5.38E-14 95 123 ornithine carbamoyltransferase activity; amino acid binding; arginine biosynthetic process; proline metabolic process; ornithine carbamoyltransferase complex; chloroplast; transferase activity; binding; biosynthetic process; cellular amino acid and derivative metabolic process; cytoplasm; plastid;
5946319 ERL1a ERL1a AtERECTA-like receptor S/T protein kinase protein[Physcomitrella patens subsp. patens] download
 
Rhizophora mangle Rmv3_8542 502 168062316 XP_001783127 erl1a -like receptor s t protein kinase protein 5.15E-13 72 153 protein kinase activity; nucleotide binding; cellular metabolic process; cytoplasmic membrane-bounded vesicle; kinase activity; nucleotide binding; metabolic process; cellular process; cytoplasm;
5948062 PHYPADRAFT_227553 hypothetical protein[Physcomitrella patens subsp. patens] download
 
Rhizophora mangle Rmv3_8814 1041 168065858 XP_001784863 protein 1.05E-139 91 588 ATP-dependent helicase activity; nucleic acid binding; ATP binding; auxin biosynthetic process; hydrolase activity; nucleic acid binding; nucleotide binding; biosynthetic process; cellular process;
5981367 SNOG_14249 hypothetical protein[Phaeosphaeria nodorum SN15] download
 
Rhizophora mangle Rmv3_10460 452 169622069 XP_001804444 hypothetical protein SNOG_14249 [Phaeosphaeria nodorum SN15] 4.59E-05 80 108
5999954 rpl14 ribosomal protein L14[Manihot esculenta] download
 
Rhizophora mangle Rmv3_15312 623 169794109 YP_001718473 ribosomal protein l14 3.09E-55 96 363 structural constituent of ribosome; rRNA binding; translation; ribosome biogenesis; large ribosomal subunit; chloroplast; structural molecule activity; RNA binding; translation; cellular process; ribosome; plastid;
5999961 rpoC2 RNA polymerase beta'' subunit[Manihot esculenta] download
 
Rhizophora mangle Rmv3_25764 451 169794063 YP_001718427 rna polymerase beta subunit 2.05E-64 92 372 DNA-directed RNA polymerase activity; DNA binding; transcription, DNA-dependent; purine base metabolic process; pyrimidine base metabolic process; chloroplast; nucleolus; transferase activity; DNA binding; transcription; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; plastid; nucleolus;
5999982 rpl23 ribosomal protein L23[Manihot esculenta] download
 
Rhizophora mangle Rmv3_18031 120 169794115 YP_001718479 ribosomal protein l23 1.21E-13 97 117 structural constituent of ribosome; rRNA binding; nucleotide binding; translation; ribosome biogenesis; ribosome; chloroplast; structural molecule activity; RNA binding; nucleotide binding; translation; cellular process; ribosome; plastid;
5999984 ycf1 hypothetical chloroplast RF1[Manihot esculenta] download
 
Rhizophora mangle Rmv3_27474 589 169794130 YP_001718494 hypothetical chloroplast rf1 1.62E-76 93 522 chloroplast membrane; integral to membrane; membrane; plastid;
5999988 petA cytochrome f[Manihot esculenta] download
 
Rhizophora mangle Rmv3_12658 1274 169794086 YP_001718450 cytochrome f 8.88E-153 98 840 electron carrier activity; heme binding; transport; photosynthesis; electron transport chain; electron transport; integral to thylakoid membrane; chloroplast thylakoid membrane; mitochondrion; molecular_function; binding; transport; photosynthesis; generation of precursor metabolites and energy; membrane; thylakoid; plastid; mitochondrion;
6000000 ycf2 Ycf2[Manihot esculenta] download
 
Rhizophora mangle Rmv3_32207 350 169794116 YP_001718480 ycf2 2.96E-60 97 348 ATP binding; nucleoside-triphosphatase activity; auxin biosynthetic process; chloroplast stroma; nucleotide binding; hydrolase activity; biosynthetic process; cellular process; plastid;
6000024 rpl20 ribosomal protein L20[Manihot esculenta] download
 
Rhizophora mangle Rmv3_25783 473 169794096 YP_001718460 ribosomal protein l20 1.67E-47 93 336 structural constituent of ribosome; rRNA binding; translation; ribosomal large subunit assembly; ribosome; chloroplast; structural molecule activity; RNA binding; translation; cellular component organization; cellular process; ribosome; plastid;
6000030 psaB photosystem I P700 chlorophyll a apoprotein A2[Manihot esculenta] download
 
Rhizophora mangle Rmv3_1914 2004 169794072 YP_001718436 photosystem i p700 apoprotein a2 0 97 1848 electron carrier activity; magnesium ion binding; chlorophyll binding; 4 iron, 4 sulfur cluster binding; transport; protein-chromophore linkage; photosynthesis; electron transport chain; electron transport; integral to membrane; photosystem I; chloroplast thylakoid membrane; molecular_function; binding; transport; protein modification process; photosynthesis; generation of precursor metabolites and energy; membrane; thylakoid; plastid;
6000076 atpA ATP synthase CF1 alpha subunit[Manihot esculenta] download
 
Rhizophora mangle Rmv3_9622 1718 169794058 YP_001718422 atp synthase cf1 alpha subunit 0 97 1521 hydrogen ion transporting ATP synthase activity, rotational mechanism; ATP binding; proton-transporting ATPase activity, rotational mechanism; plasma membrane ATP synthesis coupled proton transport; auxin biosynthetic process; proton-transporting ATP synthase complex, catalytic core F(1); mitochondrion; chloroplast thylakoid membrane; transporter activity; nucleotide binding; hydrolase activity; transport; generation of precursor metabolites and energy; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; biosynthetic process; cellular process; membrane; intracellular; mitochondrion; plastid; thylakoid;
6098482 Bm1_17870 hypothetical protein[Brugia malayi] download
 
Rhizophora mangle Rmv3_5653 754 170579899 XP_001895031 chk1 checkpoint-like protein 3.90E-17 87 168
Rhizophora mangle Rmv3_32220 391 170579899 XP_001895031 secreted protein 1.36E-09 79 129
6240517 WTF1 ubiquitin carboxyl-terminal hydrolase-like protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_28403 504 186511411 NP_001118908 ubiquitin thiolesterase 2.19E-55 96 501 binding; binding;
6435758 MtrDRAFT_AC140549g4v2 Protein kinase[Medicago truncatula] download
 
Rhizophora mangle Rmv3_3859 1132 92893880 ABE91930 atsk41 (shaggy-like protein kinase 41) atp binding protein kinase protein serine threonine kinase 7.31E-116 98 612 tau-protein kinase activity; protein binding; ATP binding; protein serine/threonine kinase activity; auxin biosynthetic process; protein amino acid phosphorylation; serine family amino acid metabolic process; kinase activity; protein binding; nucleotide binding; biosynthetic process; cellular process; protein modification process; cellular amino acid and derivative metabolic process;
Rhizophora mangle Rmv3_24740 325 92893880 ABE91930 atsk41 (shaggy-like protein kinase 41) atp binding protein kinase protein serine threonine kinase 3.87E-36 94 231 protein binding; ATP binding; protein serine/threonine kinase activity; auxin biosynthetic process; protein amino acid phosphorylation; serine family amino acid metabolic process; protein binding; nucleotide binding; kinase activity; biosynthetic process; cellular process; protein modification process; cellular amino acid and derivative metabolic process;
6435921 MtrDRAFT_AC155889g15v2 Ribosomal protein S7[Medicago truncatula] download
 
Rhizophora mangle Rmv3_9009 544 124360275 ABN08288 arginine serine-rich coiled coil 2.98E-20 90 363 ribosome; ribosome;