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Mangrove Transcriptome Database (v3)

Search Genes

Species Gene ID (exact) Locus (exact) Annotation Alternative names
GO Function GO Process GO Component
GO Slim Function GO Slim Process GO Slim Component

Listing Genes

Genes found: 16028

Gene ID Locus Annotation Alternative names Seq
Query: Species Query Name Size GI Accession Short ID E-value Mean Similarity Alignment Length GO Function GO Process GO Component GO Slim Function GO Slim Process GO Slim Component
7453636 POPTRDRAFT_818176 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_932 717 224078183 XP_002305500 chaperone protein dnaj chloroplast 5.41E-35 89 237 heat shock protein binding; protein binding;
7453639 POPTRDRAFT_818181 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_19446 244 224080606 XP_002306177 nodulin family protein 1.45E-35 97 243 endomembrane system; cell;
7453642 MYB221 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_4871 454 224080616 XP_002306180 myb transcription factor 1.04E-65 81 483 DNA binding; protein binding; regulation of transcription; nucleus; DNA binding; protein binding; transcription; nucleus;
7453644 NTMC2T1.1 plant synaptotagmin[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_19786 240 224080620 XP_002306182 plant synaptotagmin 5.21E-26 89 171
7453647 POPTRDRAFT_713347 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_11546 318 224080626 XP_002306185 farnesylated protein 8.16E-34 96 237 metal ion binding; protein binding; metal ion transport; heat acclimation; binding; protein binding; transport; response to stress; response to abiotic stimulus;
Rhizophora mangle Rmv3_18889 486 224080626 XP_002306185 farnesylated protein 7.79E-53 95 339 metal ion binding; protein binding; metal ion transport; heat acclimation; binding; protein binding; transport; response to stress; response to abiotic stimulus;
7453648 POPTRDRAFT_855472 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_22329 419 224078329 XP_002305522 predicted protein [Populus trichocarpa] 2.23E-15 76 279
7453657 POPTRDRAFT_713387 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_3799 940 224078369 XP_002305529 protein phosphatase 4.77E-112 93 684 metal ion binding; protein serine/threonine phosphatase activity; protein amino acid dephosphorylation; protein serine/threonine phosphatase complex; mitochondrion; binding; hydrolase activity; protein modification process; cell; mitochondrion;
Rhizophora mangle Rmv3_19573 879 224078369 XP_002305529 protein phosphatase 2.12E-137 93 783 metal ion binding; protein serine/threonine phosphatase activity; protein amino acid dephosphorylation; protein serine/threonine phosphatase complex; binding; hydrolase activity; protein modification process; cell;
Rhizophora mangle Rmv3_25440 330 224078369 XP_002305529 protein phosphatase 9.75E-48 94 321 metal ion binding; protein serine/threonine phosphatase activity; protein amino acid dephosphorylation; protein serine/threonine phosphatase complex; mitochondrion; binding; hydrolase activity; protein modification process; cell; mitochondrion;
7453659 POPTRDRAFT_818217 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_31588 345 224078397 XP_002305534 importin beta- 7.83E-53 94 342 protein transporter activity; binding; multidimensional cell growth; meristem structural organization; auxin polar transport; leaf morphogenesis; leaf vascular tissue pattern formation; radial pattern formation; protein import into nucleus, docking; nuclear pore; cytoplasm; transporter activity; binding; cell growth; anatomical structure morphogenesis; multicellular organismal development; transport; cellular component organization; cellular process; membrane; nuclear envelope; cytoplasm;
7453661 PtrLAT3 neutral amino acid transport protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_5153 777 224080658 XP_002306199 neutral amino acid transport protein 5.51E-94 91 657 cationic amino acid transmembrane transporter activity; amino acid transport; transmembrane transport; cation transport; polyamine transport; integral to membrane; transporter activity; transport; cellular process; membrane;
7453669 POPTRDRAFT_648837 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_15754 319 224080676 XP_002306207 geranylgeranyl pyrophosphate synthase-related protein 1.76E-28 74 333 oxidoreductase activity; farnesyltranstransferase activity; steroid biosynthetic process; terpenoid biosynthetic process; catalytic activity; transferase activity; biosynthetic process; cellular process; lipid metabolic process; secondary metabolic process;
7453704 POPTRDRAFT_776836 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_23159 316 224137316 XP_002322527 predicted protein [Populus trichocarpa] 8.22E-10 74 189
7453706 POPTRDRAFT_575957 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_19238 169 224137348 XP_002322535 predicted protein [Populus trichocarpa] 1.17E-08 74 162 metabolic process; metabolic process;
7453707 POPTRDRAFT_575961 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_14391 400 224139542 XP_002323161 predicted protein [Populus trichocarpa] 8.75E-12 72 273
7453709 POPTRDRAFT_254823 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_18530 456 224137360 XP_002322538 transcription factor rap30 interaction 2.09E-42 90 330 transcription initiation factor activity; protein C-terminus binding; DNA binding; transcription activator activity; catalytic activity; RNA polymerase II transcription factor activity; transcription initiation from RNA polymerase II promoter; positive regulation of transcription; regulation of transcription from RNA polymerase II promoter; transcription factor complex; transcription regulator activity; protein binding; DNA binding; catalytic activity; cellular component organization; transcription; nucleoplasm;
Rhizophora mangle Rmv3_25627 326 224137360 XP_002322538 mutant tfiif-alpha 5.97E-37 86 276 transcription initiation factor activity; protein C-terminus binding; DNA binding; transcription activator activity; catalytic activity; RNA polymerase II transcription factor activity; transcription initiation from RNA polymerase II promoter; positive regulation of transcription; regulation of transcription from RNA polymerase II promoter; transcription factor complex; transcription regulator activity; protein binding; DNA binding; catalytic activity; cellular component organization; transcription; nucleoplasm;
7453714 POPTRDRAFT_575969 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_13719 413 224139558 XP_002323168 udp-glucoronosyl udp-glucosyl transferase family protein 2.17E-47 85 393 anthocyanidin 3-O-glucosyltransferase activity; flavonoid biosynthetic process; transferase activity; biosynthetic process; cellular amino acid and derivative metabolic process; secondary metabolic process;
Rhizophora mangle Rmv3_29221 495 224139558 XP_002323168 predicted protein 1.19E-37 65 489 transferase activity; metabolic process; transferase activity; metabolic process;
7453722 POPTRDRAFT_575991 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_23993 373 224139574 XP_002323176 fhy3 (far-red elongated hypocotyls 3) transcription activator transcription factor 3.88E-52 89 366 oxidoreductase activity, acting on the CH-CH group of donors; zinc ion binding; transcription activator activity; protein binding; transcription factor activity; fatty-acyl-CoA reductase (alcohol-forming) activity; red, far-red light phototransduction; microsporogenesis; circadian rhythm; far-red light signaling pathway; positive regulation of transcription; transcription factor complex; catalytic activity; binding; transcription regulator activity; protein binding; transcription factor activity; response to external stimulus; signal transduction; response to abiotic stimulus; multicellular organismal development; cell cycle; biological_process; transcription; nucleoplasm;
7453740 POPTRDRAFT_576045 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_9832 801 224137492 XP_002322571 glutathione s- 3.30E-89 88 672 lactoylglutathione lyase activity; transferase activity; protein binding; carbohydrate metabolic process; pyruvate metabolic process; catalytic activity; transferase activity; protein binding; carbohydrate metabolic process; metabolic process; cellular process;
7453741 POPTRDRAFT_255039 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_27594 749 224139616 XP_002323194 predicted protein 5.29E-59 87 438 adenylylsulfatase activity; zinc ion binding; protein kinase C binding; sulfur metabolic process; purine ribonucleotide metabolic process; peroxisome; plasma membrane; hydrolase activity; binding; protein binding; metabolic process; cellular process; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; peroxisome; plasma membrane;
7453744 POPTRDRAFT_667207 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_8804 874 224137520 XP_002322578 u3 small nucleolar rna-associated 2.26E-97 91 654 rRNA processing; megagametogenesis; small-subunit processome; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; multicellular organismal development; intracellular;
Rhizophora mangle Rmv3_12597 456 224137520 XP_002322578 u3 small nucleolar rna-associated 1.11E-43 92 330 rRNA processing; small-subunit processome; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; intracellular;
7453745 POPTRDRAFT_734665 aquaporin, MIP family, SIP subfamily[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_5514 313 224137540 XP_002322583 mip sip subfamily 1.76E-36 83 312 transporter activity; transport; integral to membrane; endoplasmic reticulum; transporter activity; transport; membrane; endoplasmic reticulum;
Rhizophora mangle Rmv3_10350 886 224137540 XP_002322583 mip sip subfamily 2.28E-93 89 483 transporter activity; transport; integral to membrane; endoplasmic reticulum; transporter activity; transport; membrane; endoplasmic reticulum;
7453751 POPTRDRAFT_733232 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_11410 496 224133440 XP_002321568 calmodulin binding 1.19E-53 78 492
7453752 POPTRDRAFT_733244 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_7749 710 224133448 XP_002321570 predicted protein [Populus trichocarpa] 8.45E-32 85 306 mitochondrion; mitochondrion;
7453754 POPTRDRAFT_733255 nucleobase ascorbate transporter[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_23940 374 224135763 XP_002322154 nucleobase ascorbate transporter 1.21E-37 91 243 transmembrane transporter activity; transmembrane transport; membrane; vacuole; cell wall; transporter activity; transport; cellular process; membrane; vacuole; cell wall;
Rhizophora mangle Rmv3_25855 723 224135763 XP_002322154 nucleobase ascorbate transporter 6.05E-81 95 501 transmembrane transporter activity; transmembrane transport; membrane; vacuole; cell wall; transporter activity; transport; cellular process; membrane; vacuole; cell wall;
Rhizophora mangle Rmv3_28734 310 224135763 XP_002322154 nucleobase ascorbate transporter 9.06E-38 96 306 transmembrane transporter activity; transmembrane transport; membrane; vacuole; cell wall; transporter activity; transport; cellular process; membrane; vacuole; cell wall;
7453757 POPTRDRAFT_251989 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_14242 284 224133476 XP_002321577 serine endopeptidase 5.33E-41 87 294 serine-type endopeptidase activity; DNA binding; protein binding; 2-alkenal reductase activity; oxidation reduction; proteolysis; regulation of transcription, DNA-dependent; hydrolase activity; DNA binding; protein binding; catalytic activity; metabolic process; protein metabolic process; catabolic process; transcription;
7453762 POPTRDRAFT_575141 hypothetical protein[Populus trichocarpa] download
 
Rhizophora mangle Rmv3_20816 588 224135791 XP_002322161 dna binding 6.45E-33 84 336 transcription regulator activity; binding; regulation of transcription; nucleus; transcription regulator activity; binding; transcription; nucleus;