counter Mtdbheader

Mangrove Transcriptome Database (v3)

Search Genes

Species Gene ID (exact) Locus (exact) Annotation Alternative names
GO Function GO Process GO Component
GO Slim Function GO Slim Process GO Slim Component

Listing Genes

Genes found: 16028

Gene ID Locus Annotation Alternative names Seq
Query: Species Query Name Size GI Accession Short ID E-value Mean Similarity Alignment Length GO Function GO Process GO Component GO Slim Function GO Slim Process GO Slim Component
100268072 LOC100268072 auxin response factor 2-like[Vitis vinifera] download
 
Rhizophora mangle Rmv3_15207 1152 225456475 XP_002284543 arf1-binding protein 2.12E-118 75 1032 protein binding; DNA binding; response to hormone stimulus; regulation of transcription; nucleus; protein binding; DNA binding; response to endogenous stimulus; transcription; nucleus;
Rhizophora mangle Rmv3_26878 700 225456475 XP_002284543 auxin response factor-like protein 7.40E-41 83 330 DNA binding; protein dimerization activity; auxin mediated signaling pathway; regulation of transcription, DNA-dependent; nucleus; DNA binding; protein binding; response to endogenous stimulus; signal transduction; transcription; nucleus;
Rhizophora mangle Rmv3_29067 341 225456475 XP_002284543 PREDICTED: hypothetical protein 9.64E-48 95 294 DNA binding; protein dimerization activity; auxin mediated signaling pathway; regulation of transcription, DNA-dependent; nucleus; DNA binding; protein binding; response to endogenous stimulus; signal transduction; transcription; nucleus;
Rhizophora mangle Rmv3_29512 590 225456475 XP_002284543 PREDICTED: hypothetical protein 5.14E-14 81 174 DNA binding; protein dimerization activity; auxin mediated signaling pathway; regulation of transcription, DNA-dependent; nucleus; DNA binding; protein binding; response to endogenous stimulus; signal transduction; transcription; nucleus;
Rhizophora mangle Rmv3_30932 524 225456475 XP_002284543 PREDICTED: hypothetical protein [Vitis vinifera] 3.23E-10 75 174 binding; response to hormone stimulus; regulation of transcription; binding; response to endogenous stimulus; transcription;
Rhizophora mangle Rmv3_31388 1078 225456475 XP_002284543 auxin response 8.30E-130 79 1092 DNA binding; protein dimerization activity; auxin mediated signaling pathway; regulation of transcription, DNA-dependent; nucleus; DNA binding; protein binding; response to endogenous stimulus; signal transduction; transcription; nucleus;
Rhizophora mangle Rmv3_33322 451 225456475 XP_002284543 auxin response factor-like protein 2.77E-18 77 204 transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; protein binding; transcription factor activity; reproduction; flower development; cellular process; abscission; biological_process; transcription; signal transduction; response to endogenous stimulus; nucleoplasm;
100268077 LOC100268077 uncharacterized LOC100268077[Vitis vinifera] download
 
Rhizophora mangle Rmv3_17473 615 225445256 XP_002284517 af380653_1 at2g17240 5.93E-19 73 219 chloroplast; plastid;
100268105 LOC100268105 outer envelope protein 64, mitochondrial-like[Vitis vinifera] download
 
Rhizophora mangle Rmv3_3997 292 225448253 XP_002268888 amidase family protein 7.11E-30 80 288 carbon-nitrogen ligase activity, with glutamine as amido-N-donor; protein binding; amidase activity; arginine metabolic process; L-phenylalanine metabolic process; proline metabolic process; tryptophan metabolic process; benzoate metabolic process; styrene catabolic process; catalytic activity; protein binding; hydrolase activity; cellular amino acid and derivative metabolic process; metabolic process; cellular process; catabolic process;
Rhizophora mangle Rmv3_8908 761 225448253 XP_002268888 amidase family protein 1.38E-102 87 693 carbon-nitrogen ligase activity, with glutamine as amido-N-donor; protein binding; amidase activity; arginine metabolic process; L-phenylalanine metabolic process; proline metabolic process; tryptophan metabolic process; benzoate metabolic process; styrene catabolic process; catalytic activity; protein binding; hydrolase activity; cellular amino acid and derivative metabolic process; metabolic process; cellular process; catabolic process;
100271890 ZIP bZIP transcription factor[Solanum lycopersicum] download
 
Rhizophora mangle Rmv3_29209 382 224459179 ACN43325 bZIP transcription factor 4.42E-24 91 204 sequence-specific DNA binding; protein dimerization activity; transcription factor activity; regulation of transcription, DNA-dependent; transcription factor complex; DNA binding; protein binding; transcription factor activity; transcription; nucleoplasm;
100272911 pco094428 Official Symbol: pco094428 and Name: LOC100272911[Zea mays] PCO094428_ov; pco094428(696); uncharacterized protein LOC100272911 download
 
Rhizophora mangle Rmv3_28405 315 226530579 NP_001140835 hypothetical protein LOC100272911 1.75E-44 98 279 ATP binding; response to stress; auxin biosynthetic process; nucleotide binding; response to stress; biosynthetic process; cellular process;
100272972 LOC100272972 uncharacterized LOC100272972[Zea mays] uncharacterized protein LOC100272972 download
 
Rhizophora mangle Rmv3_10815 217 195652333 ACG45634 na+ h+ antiporter 6.10E-26 100 183 sodium:hydrogen antiporter activity; transmembrane transport; regulation of pH; sodium ion transport; proton transport; integral to membrane; transporter activity; transport; cellular process; biological_process; membrane;
100273073 LOC100273073 uncharacterized LOC100273073[Zea mays] uncharacterized protein LOC100273073 download
 
Rhizophora mangle Rmv3_16689 720 226507778 NP_001140994 regulator of chromosome condensation family protein 1.04E-112 89 492 chromatin binding; Ran GTPase binding; chromatin; chromatin binding; protein binding; intracellular;
100274249 pco130308(330) Official Symbol: pco130308(330) and Name: LOC100274249[Zea mays] uncharacterized protein LOC100274249 download
 
Rhizophora mangle Rmv3_10453 245 226504700 NP_001142087 amino acid 1.60E-11 63 165 integral to membrane; membrane;
100274298 LOC100274298 uncharacterized LOC100274298[Zea mays] uncharacterized protein LOC100274298 download
 
Rhizophora mangle Rmv3_4067 292 226492613 NP_001142134 reversibly glycosylated polypeptide 9.88E-48 98 279 glycogenin glucosyltransferase activity; cellulose biosynthetic process; cellular cell wall organization; plant-type cell wall; Golgi apparatus; plasmodesma; extracellular region; transferase activity; biosynthetic process; carbohydrate metabolic process; cellular process; cellular component organization; cell wall; Golgi apparatus; plasma membrane; extracellular region;
100278459 LOC100278459 uncharacterized LOC100278459[Zea mays] uncharacterized protein LOC100278459 download
 
Rhizophora mangle Rmv3_5886 534 195618304 ACG30982 nadh ubiquinone oxidoreductase b22-like subunit 1.42E-43 85 291 catalytic activity; photorespiration; respiratory chain complex I; plasma membrane; mitochondrial membrane; catalytic activity; biosynthetic process; cellular process; membrane; intracellular; plasma membrane; mitochondrion;
100279513 LOC100279513 uncharacterized LOC100279513[Zea mays] uncharacterized protein LOC100279513 download
 
Rhizophora mangle Rmv3_16323 605 194708072 ACF88120 thioredoxin transketolase fusion protein 3.26E-107 95 603 metal ion binding; transketolase activity; pentose-phosphate shunt; carbon utilization; chloroplast thylakoid membrane; binding; transferase activity; carbohydrate metabolic process; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; catabolic process; secondary metabolic process; metabolic process; membrane; plastid; thylakoid;
Rhizophora mangle Rmv3_31474 603 194708072 ACF88120 thioredoxin transketolase fusion protein 1.12E-107 96 600 metal ion binding; transketolase activity; pentose-phosphate shunt; carbon utilization; chloroplast thylakoid membrane; binding; transferase activity; carbohydrate metabolic process; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; catabolic process; secondary metabolic process; metabolic process; membrane; plastid; thylakoid;
100279968 LOC100279968 uncharacterized LOC100279968[Zea mays] uncharacterized protein LOC100279968 download
 
Rhizophora mangle Rmv3_10559 262 226501688 NP_001146388 hypothetical protein LOC100279968 [Zea mays] 8.75E-04 69 126
100280354 LOC100280354 uncharacterized LOC100280354[Zea mays] uncharacterized protein LOC100280354 download
 
Rhizophora mangle Rmv3_15987 290 226495067 NP_001146752 heat shock protein 70 8.70E-36 100 234 ATP binding; unfolded protein binding; 2-alkenal reductase activity; auxin biosynthetic process; protein folding; response to stress; oxidation reduction; plastid; nucleotide binding; protein binding; catalytic activity; biosynthetic process; cellular process; protein metabolic process; response to stress; metabolic process; plastid;
100280637 LOC100280637 polyubiquitin containing 7 ubiquitin monomers[Zea mays] download
 
Rhizophora mangle Rmv3_15870 292 226499354 NP_001147027 polyubiquitin containing 7 ubiquitin monomers 6.42E-39 97 261
100280898 LOC100280898 inner membrane protein ybaL[Zea mays] download
 
Rhizophora mangle Rmv3_10228 1349 226499046 NP_001147290 potassium efflux antiporter 2.05E-56 79 267 potassium:hydrogen antiporter activity; transmembrane transport; potassium ion transport; proton transport; integral to membrane; mitochondrion; transporter activity; transport; cellular process; membrane; mitochondrion;
100280916 LOC100280916 protein transport protein SEC61 gamma subunit[Zea mays] download
 
Rhizophora mangle Rmv3_18919 391 226508450 NP_001147308 protein transport protein sec61 gamma subunit 3.13E-22 98 207 P-P-bond-hydrolysis-driven protein transmembrane transporter activity; protein targeting; membrane; chloroplast envelope; protein binding; transporter activity; transport; cellular process; membrane; plastid;
100281154 LOC100281154 peptidoglycan binding domain containing protein[Zea mays] download
 
Rhizophora mangle Rmv3_18126 267 226530405 NP_001147545 peptidoglycan binding domain containing protein 1.38E-17 92 153 unfolded protein binding; heat shock protein binding; protein folding; plastid; protein binding; protein metabolic process; cellular process; plastid;
100282027 LOC100282027 photosystem I reaction center subunit III[Zea mays] download
 
Rhizophora mangle Rmv3_23646 501 226532407 NP_001148412 photosystem i reaction center subunit iii 7.81E-58 90 219 photosynthesis; photosystem I reaction center; plastid; photosynthesis; membrane; thylakoid; plastid;
100283904 pco086002 LOC100283904[Zea mays] PCO086002_ov; pco086002(479); vacuolar ATP synthase 16 kDa proteolipid subunit download
 
Rhizophora mangle Rmv3_16253 300 226532176 NP_001150274 vacuolar atp synthase 16 kda proteolipid subunit 2.96E-20 98 201 hydrogen ion transmembrane transporter activity; ATPase activity; ATP synthesis coupled proton transport; integral to membrane; proton-transporting V-type ATPase, V0 domain; vacuolar membrane; cytoplasmic membrane-bounded vesicle; plasma membrane; transporter activity; hydrolase activity; transport; biosynthetic process; generation of precursor metabolites and energy; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; membrane; vacuole; cytoplasm; plasma membrane;
100283927 LOC100283927 postsynaptic protein CRIPT[Zea mays] cysteine-rich PDZ-binding protein download
 
Rhizophora mangle Rmv3_16300 574 226493364 NP_001150297 postsynaptic protein cript 7.15E-50 96 288
100284157 LOC100284157 EMB2752[Zea mays] download
 
Rhizophora mangle Rmv3_16717 626 226530975 NP_001150526 emb2752 (embryo defective 2752) 2.49E-24 78 141 embryonic development ending in seed dormancy; mitochondrion; reproduction; post-embryonic development; embryonic development; mitochondrion;
100285108 LOC100285108 endoplasmin[Zea mays] download
 
Rhizophora mangle Rmv3_28945 313 226502706 NP_001151475 endoplasmin 9.97E-48 100 309 structural constituent of ribosome; ATP binding; unfolded protein binding; protein folding; response to stress; translation; ribosome biogenesis; ribosome; endoplasmic reticulum lumen; cytoplasmic membrane-bounded vesicle; structural molecule activity; nucleotide binding; protein binding; protein metabolic process; cellular process; response to stress; translation; ribosome; endoplasmic reticulum; cytoplasm;
100285139 LOC100285139 protein binding protein[Zea mays] download
 
Rhizophora mangle Rmv3_3718 1999 226500016 NP_001151505 protein binding protein 9.51E-134 76 483 protein binding; plasma membrane; protein binding; plasma membrane;
100301888 ZTL2 clock-associated PAS protein ZEITLUPE 2[Glycine max] download
 
Rhizophora mangle Rmv3_15696 169 87138099 ABD28286 f-box family protein 3.26E-27 100 165 scavenger receptor activity; protein binding; signal transduction; regulation of transcription, DNA-dependent; membrane; receptor activity; protein binding; signal transduction; transcription; membrane;
Rhizophora mangle Rmv3_17493 177 87138099 ABD28286 f-box family protein 4.67E-26 98 174 scavenger receptor activity; protein binding; signal transduction; regulation of transcription, DNA-dependent; membrane; receptor activity; protein binding; signal transduction; transcription; membrane;
Rhizophora mangle Rmv3_27525 342 87138099 ABD28286 clock-associated PAS protein ZEITLUPE 2 9.94E-48 98 339 ubiquitin-protein ligase activity; protein binding; scavenger receptor activity; blue light photoreceptor activity; response to red light; regulation of transcription, DNA-dependent; flower development; entrainment of circadian clock by photoperiod; signal transduction; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; protein ubiquitination; cytosol; SCF ubiquitin ligase complex; membrane; nucleus; catalytic activity; protein binding; receptor activity; response to abiotic stimulus; transcription; flower development; response to external stimulus; signal transduction; protein metabolic process; catabolic process; cellular process; protein modification process; cytosol; intracellular; membrane; nucleus;
100301889 FKF1 circadian clock-associated FKF1[Glycine max] download
 
Rhizophora mangle Rmv3_27983 387 87138101 ABD28287 circadian clock-associated FKF1 1.41E-30 94 204 signal transducer activity; ubiquitin-protein ligase activity; protein binding; ubiquitin-dependent protein catabolic process; regulation of transcription, DNA-dependent; positive regulation of flower development; circadian rhythm; response to blue light; signal transduction; protein ubiquitination; signal transducer activity; catalytic activity; protein binding; protein metabolic process; catabolic process; cellular process; transcription; flower development; biological_process; response to abiotic stimulus; signal transduction; protein modification process;
Rhizophora mangle Rmv3_33296 743 87138101 ABD28287 at1g68050 t23k23_10 9.29E-125 93 741 transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; signal transducer activity; catalytic activity; protein binding; protein metabolic process; catabolic process; cellular process; transcription; flower development; biological_process; response to abiotic stimulus; signal transduction; protein modification process;