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Mangrove Transcriptome Database (v3)

Search Genes

Species Gene ID (exact) Locus (exact) Annotation Alternative names
GO Function GO Process GO Component
GO Slim Function GO Slim Process GO Slim Component

Listing Genes

Genes found: 16028

Gene ID Locus Annotation Alternative names Seq
Query: Species Query Name Size GI Accession Short ID E-value Mean Similarity Alignment Length GO Function GO Process GO Component GO Slim Function GO Slim Process GO Slim Component
834158 AT5G41560 DET1- and DDB1-associated protein 1[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_5258 432 15238120 NP_198971 unknown protein [Arabidopsis thaliana] 2.72E-25 87 165 chloroplast; plastid;
834214 AT5G42090 Lung seven transmembrane receptor family protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_7829 1051 15238277 NP_199024 lung seven transmembrane 1.21E-103 82 747 receptor activity; signal transduction; endomembrane system; cytoplasmic membrane-bounded vesicle; integral to membrane; receptor activity; signal transduction; cell; cytoplasm; membrane;
834421 PDLP1 cysteine-rich repeat secretory protein 56[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_16060 1032 30694417 NP_199211 duf26 domain-containing protein 2 1.11E-68 66 534
834605 AT5G45650 subtilase family protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_6685 435 15242456 NP_199378 subtilase family protein 3.24E-27 86 237 identical protein binding; serine-type endopeptidase activity; 2-alkenal reductase activity; negative regulation of catalytic activity; oxidation reduction; proteolysis; endomembrane system; protein binding; hydrolase activity; catalytic activity; biological_process; metabolic process; protein metabolic process; catabolic process; cell;
835025 AAP6 amino acid permease 6[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_26158 325 15240523 NP_199774 amino acid permease 6 2.27E-36 90 252 acidic amino acid transmembrane transporter activity; neutral amino acid transmembrane transporter activity; tryptophan transport; aspartate transport; neutral amino acid transport; integral to membrane; transporter activity; transport; membrane;
835096 AT5G50310 kelch repeat-containing protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_11457 220 18423130 NP_568723 kelch repeat-containing protein 2.54E-29 97 147 protein binding; protein binding;
835276 AT5G52010 C2H2-like zinc finger protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_30334 555 15242250 NP_200014 at5g52010 msg15_9 5.85E-43 76 489 transcription factor activity; zinc ion binding; regulation of transcription; plastid; transcription factor complex; transcription factor activity; binding; transcription; plastid; nucleoplasm;
835393 CNGC1 cyclic nucleotide-gated ion channel 1[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_17185 534 15238657 NP_200125 cyclic nucleotide-regulated ion channel 1.19E-79 87 537 cyclic nucleotide binding; inward rectifier potassium channel activity; intracellular cyclic nucleotide activated cation channel activity; calmodulin binding; calcium ion transport; transmembrane transport; potassium ion transport; voltage-gated potassium channel complex; intracellular; intracellular cyclic nucleotide activated cation channel complex; nucleotide binding; transporter activity; protein binding; transport; cellular process; plasma membrane; intracellular; membrane;
835548 AT5G54590 protein kinase family protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_14014 637 30696480 NP_568809 protein kinase family protein 3.14E-94 93 381 ATP binding; protein serine/threonine kinase activity; protein amino acid phosphorylation; serine family amino acid metabolic process; endomembrane system; nucleotide binding; kinase activity; protein modification process; cellular amino acid and derivative metabolic process; cell;
835728 PEX5 peroxin 5[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_33005 335 15241175 NP_200440 peroxisomal targeting signal type 1 receptor 1.72E-28 68 342 transcription regulator activity; transcription regulator activity; transcription regulator activity; protein binding; transport; cellular component organization; cellular process; response to endogenous stimulus;
835891 AT5G57815 cytochrome c oxidase subunit VIb[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_14320 451 18424030 NP_568867 cytochrome c oxidase subunit 3.51E-21 94 153 cytochrome-c oxidase activity; mitochondrial electron transport, cytochrome c to oxygen; proton transport; mitochondrion; respiratory chain complex IV; catalytic activity; transporter activity; generation of precursor metabolites and energy; transport; mitochondrion; membrane; intracellular;
835941 RPT3 regulatory particle triple-A ATPase 3[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_6497 797 15237159 NP_200637 26s protease regulatory subunit 3.69E-101 100 561 peptidase activity; signal transducer activity; ATP binding; microtubule-severing ATPase activity; protein binding; ubiquitin-dependent protein catabolic process; blue light signaling pathway; auxin biosynthetic process; phototropism; signal transduction; proteasome regulatory particle, base subcomplex; cytoplasm; nucleus; plasma membrane; hydrolase activity; signal transducer activity; nucleotide binding; protein binding; protein metabolic process; catabolic process; cellular process; signal transduction; response to abiotic stimulus; biosynthetic process; tropism; intracellular; cytoplasm; nucleus; plasma membrane;
Rhizophora mangle Rmv3_9014 901 15237159 NP_200637 26s protease regulatory subunit 7.18E-102 99 570 peptidase activity; signal transducer activity; ATP binding; microtubule-severing ATPase activity; protein binding; ubiquitin-dependent protein catabolic process; blue light signaling pathway; auxin biosynthetic process; phototropism; signal transduction; proteasome regulatory particle, base subcomplex; cytoplasm; nucleus; plasma membrane; hydrolase activity; signal transducer activity; nucleotide binding; protein binding; protein metabolic process; catabolic process; cellular process; signal transduction; response to abiotic stimulus; biosynthetic process; tropism; intracellular; cytoplasm; nucleus; plasma membrane;
835991 AT5G58770 dehydrodolichyl diphosphate synthase 2[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_24764 942 15237748 NP_200685 undecaprenyl pyrophosphate 1.11E-92 89 648 dehydrodolichyl diphosphate synthase activity; protein binding; di-trans,poly-cis-decaprenylcistransferase activity; zinc ion binding; dolichol biosynthetic process; terpenoid biosynthetic process; chloroplast; mitochondrion; transferase activity; protein binding; binding; biosynthetic process; cellular process; lipid metabolic process; secondary metabolic process; plastid; mitochondrion;
836584 FAS2 transducin/WD40 domain-containing protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_11001 238 42573790 NP_974991 fas2 (fasciata 2) nucleotide binding protein binding 7.50E-32 94 204 protein binding; nucleotide binding; trichome differentiation; meristem structural organization; double-strand break repair via homologous recombination; heterochromatin formation; pollen development; nucleosome assembly; cell proliferation; chromatin assembly complex; protein binding; nucleotide binding; anatomical structure morphogenesis; cell differentiation; multicellular organismal development; response to stress; DNA metabolic process; cellular component organization; cellular process; nucleus;
836826 sks17 protein SKU5 similar 17[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_4578 268 18425129 NP_569041 pectinesterase like protein 2.59E-32 95 219 copper ion binding; L-ascorbate oxidase activity; oxidation reduction; electron transport; L-ascorbic acid metabolic process; plant-type cell wall; binding; catalytic activity; metabolic process; cellular process; cell wall;
837174 AT1G06645 pseudo[Arabidopsis thaliana] download
 
837215 AT1G07040 hypothetical protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_30838 308 18390717 NP_563777 ac067971_24 ests gb 1.60E-42 92 306 mitochondrion; chloroplast; mitochondrion; plastid;
837340 VPS41 vacuolar protein sorting-associated protein 41-like protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_11589 208 42561797 NP_172297 vacuolar protein sorting 1.14E-25 100 147 zinc ion binding; protein binding; vesicle-mediated transport; intracellular protein transport; binding; protein binding; transport; cellular process;
837473 AT1G09486 pseudo[Arabidopsis thaliana] download
 
837619 SEX1 alpha-glucan water dikinase 1[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_14749 899 18391200 NP_563877 sex1 (starch excess 1) alpha- water dikinase 2.83E-110 86 366 alpha-glucan, water dikinase activity; protein binding; nucleotide binding; response to symbiotic fungus; starch catabolic process; cold acclimation; mitochondrion; chloroplast stroma; kinase activity; protein binding; nucleotide binding; response to biotic stimulus; carbohydrate metabolic process; cellular process; catabolic process; response to stress; response to abiotic stimulus; mitochondrion; plastid;
837644 AT1G11020 RING/FYVE/PHD zinc finger-containing protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_17849 664 18391230 NP_563883 zinc finger (c3hc4-type ring finger) family protein 1.47E-40 95 366 zinc ion binding; protein binding; membrane; binding; protein binding; membrane;
837816 AT1G12600 UDP-N-acetylglucosamine transporter-like protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_26174 463 15222026 NP_172720 adenosine 3 -phospho 5 -phosphosulfate 4.42E-72 98 462 transmembrane transport; integral to membrane; transport; cellular process; membrane;
838046 AT1G14810 semialdehyde dehydrogenase-like protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_19781 291 15223910 NP_172934 at1g14810 f10b6_6 9.63E-19 96 159 NAD or NADH binding; aspartate-semialdehyde dehydrogenase activity; NADP or NADPH binding; protein dimerization activity; threonine biosynthetic process; methionine biosynthetic process; oxidation reduction; glycine metabolic process; L-serine metabolic process; lysine biosynthetic process; chloroplast stroma; mitochondrion; nucleotide binding; catalytic activity; protein binding; biosynthetic process; cellular amino acid and derivative metabolic process; metabolic process; plastid; mitochondrion;
838204 AT1G16350 IMP dehydrogenase[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_566 1018 15219217 NP_173085 inosine-5 -monophosphate dehydrogenase 4.76E-108 91 699 IMP dehydrogenase activity; metal ion binding; GMP biosynthetic process; oxidation reduction; purine base metabolic process; mitochondrial inner membrane peptidase complex; catalytic activity; binding; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; biosynthetic process; metabolic process; membrane; mitochondrion;
838251 AT1G16800 hydrolase domain-containing protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_3726 249 15219364 NP_173124 trna-splicing endonuclease positive effector-related 3.71E-07 87 144 poly(U) RNA binding; RNA binding;