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Mangrove Transcriptome Database (v3)

Search Genes

Species Gene ID (exact) Locus (exact) Annotation Alternative names
GO Function GO Process GO Component
GO Slim Function GO Slim Process GO Slim Component

Listing Genes

Genes found: 16028

Gene ID Locus Annotation Alternative names Seq
Query: Species Query Name Size GI Accession Short ID E-value Mean Similarity Alignment Length GO Function GO Process GO Component GO Slim Function GO Slim Process GO Slim Component
822702 AT3G30120 pseudo[Arabidopsis thaliana] download
 
823469 AT3G43670 putative copper amine oxidase[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_4273 1739 15229749 NP_189953 amine oxidase 0 77 831 copper ion binding; amine oxidase activity; quinone binding; oxidation reduction; amine metabolic process; binding; catalytic activity; metabolic process;
823983 AT3G48250 pentatricopeptide repeat-containing protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_26356 325 15228363 NP_190408 pentatricopeptide repeat-containing protein 1.12E-43 86 318 chloroplast; plastid;
824494 AT3G53270 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_29589 358 18409805 NP_566983 unknown protein 9.82E-24 86 219
824527 AT3G53590 leucine-rich repeat protein kinase-like protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_21354 217 15231843 NP_190927 atp binding 1.19E-21 85 207 2-alkenal reductase activity; ATP binding; protein binding; MAP kinase kinase kinase activity; auxin biosynthetic process; oxidation reduction; transmembrane receptor protein tyrosine kinase signaling pathway; protein amino acid phosphorylation; transmembrane receptor protein serine/threonine kinase signaling pathway; serine family amino acid metabolic process; integral to membrane; cytoplasmic membrane-bounded vesicle; catalytic activity; nucleotide binding; protein binding; kinase activity; signal transducer activity; biosynthetic process; cellular process; metabolic process; signal transduction; protein modification process; cellular amino acid and derivative metabolic process; membrane; cytoplasm;
824686 AT3G55200 splicing factor 3B subunit 3[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_32755 314 18410222 NP_567015 protein 2.16E-26 91 210 transcription regulator activity; transcription regulator activity; transcription regulator activity; nucleic acid binding; nucleus; plastid;
824951 AT3G57820 pseudo[Arabidopsis thaliana] download
 
824956 SCE1 SUMO-conjugating enzyme SCE1[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_9172 899 15230881 NP_191346 e2 ubiquitin-conjugating-like enzyme ahus5 3.41E-80 94 330 SUMO ligase activity; protein sumoylation; embryonic development ending in seed dormancy; response to abscisic acid stimulus; regulation of protein metabolic process; nucleus; catalytic activity; protein modification process; reproduction; post-embryonic development; embryonic development; response to endogenous stimulus; protein metabolic process; nucleus;
824968 AT3G57990 hypothetical protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_14186 489 15230911 NP_191358 unknown protein [Arabidopsis thaliana] 1.79E-57 80 489
825019 PP2A-4 serine/threonine-protein phosphatase PP2A-3 catalytic subunit[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_2458 268 18410971 NP_567066 protein 6.17E-34 97 216 protein serine/threonine phosphatase activity; protein amino acid dephosphorylation; cytoplasm; nucleolus; protein phosphatase type 2A complex; hydrolase activity; protein modification process; cytoplasm; nucleolus; intracellular;
825400 AT3G62270 putative boron transporter 2[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_24863 543 15228719 NP_191786 boron transporter 8.19E-87 97 540 boron efflux transmembrane transporter activity; inorganic anion exchanger activity; boron transport; chloride transport; bicarbonate transport; endosome; vacuole; lateral plasma membrane; columella; integral to membrane; transporter activity; transport; endosome; vacuole; plasma membrane; extracellular region; membrane;
825473 TIR1 protein TRANSPORT INHIBITOR RESPONSE 1[Arabidopsis thaliana] download
 
825648 CUL1 cullin 1[Arabidopsis thaliana] download
 
825868 CRK25 cysteine-rich receptor-like protein kinase 25[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_14179 301 15234659 NP_192429 protein 1.06E-17 61 300 kinase activity; protein binding; kinase activity; protein binding;
826301 CSLC12 putative xyloglucan glycosyltransferase 12[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_6332 431 15235900 NP_192536 transferring glycosyl 4.58E-13 96 177 cellulose synthase (UDP-forming) activity; starch metabolic process; sucrose metabolic process; UDP-glucose metabolic process; cellulose biosynthetic process; membrane; transferase activity; carbohydrate metabolic process; cellular process; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; biosynthetic process; membrane;
826493 MLH1 DNA mismatch repair protein MLH1[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_9510 520 30680985 NP_567345 mlh1 protein 1.59E-18 88 162 protein binding, bridging; mismatched DNA binding; ATP binding; seed development; seed germination; mitotic recombination; mismatch repair; pollen development; nuclear chromatin; protein binding; DNA binding; nucleotide binding; reproduction; post-embryonic development; DNA metabolic process; response to stress; multicellular organismal development; nucleus;
826563 AT4G09750 Rossmann-fold NAD(P)-binding domain-containing protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_30254 374 15234031 NP_192713 short-chain dehydrogenase reductase family protein 1.29E-55 91 372 protochlorophyllide reductase activity; binding; oxidation reduction; chlorophyll biosynthetic process; photosynthesis, dark reaction; catalytic activity; binding; metabolic process; biosynthetic process; cellular process; carbohydrate metabolic process; photosynthesis;
826964 AT4G13340 leucine-rich repeat extensin-like protein 3[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_32904 347 15235668 NP_193070 extensin-like protein 1.30E-23 82 186 transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; structural molecule activity; protein binding; cellular process; cell wall;
827332 OPT3 oligopeptide transporter[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_28014 407 240255930 NP_567493 ATOPT3 (OLIGOPEPTIDE TRANSPORTER); oligopeptide transporter 5.21E-33 87 261 transmembrane transport; transport; cellular process;
827349 AT4G16510 YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_11670 231 18414678 NP_567502 prolyl-trna synthetase-related 5.58E-07 60 183
828049 PP Poly [ADP-ribose] polymerase 2[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_23246 561 30679124 NP_192148 poly(adp-ribose) polymerase 4.44E-56 87 417 DNA binding; NAD+ ADP-ribosyltransferase activity; protein amino acid ADP-ribosylation; nucleus; mitochondrion; DNA binding; transferase activity; protein modification process; nucleus; mitochondrion;
828193 AT4G02720 hypothetical protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_27890 346 22328253 NP_192181 unknown protein 1.49E-27 83 252 plastid; plastid;
828392 PYR4 dihydroorotase[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_22898 367 15235865 NP_194024 pyr4 (pyrimidin 4) dihydroorotase hydrolase acting on carbon-nitrogen (but not peptide) in cyclic amides 5.34E-14 66 252 dihydroorotase activity; pyrimidine base metabolic process; hydrolase activity; nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;
828482 AT4G23820 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_33133 392 15236625 NP_194113 glycoside hydrolase family 28 protein 1.72E-20 92 165 transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; hydrolase activity; carbohydrate metabolic process; cellular process; cell; cytoplasm;
828531 cpHsc70-1 chloroplast heat shock protein 70-1[Arabidopsis thaliana] download
 
Rhizophora mangle Rmv3_32844 393 15233779 NP_194159 heat shock protein 70 3.09E-49 86 387 transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; transcription regulator activity; nucleotide binding; protein binding; biosynthetic process; cellular process; protein metabolic process; response to stress; response to abiotic stimulus; biological_process; plastid; nucleus; mitochondrion;